Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT4P19013 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT4P19013 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT4P19013 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT4P19013 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KRT4P19013 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT4P19013 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KRT4P19013 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KRT4P19013 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KRT4P19013 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT4P19013 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT4P19013 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT4P19013 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KRT4P19013 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT4P19013 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KRT4P19013 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT4P19013 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT4P19013 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT4P19013 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.83■□□□□ 0.44
KRT4P19013 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT4P19013 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT4P19013 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT4P19013 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT4P19013 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT4P19013 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT4P19013 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 AC092338.2-201ENST00000568827 1415 ntBASIC17.82■□□□□ 0.44
KRT4P19013 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KRT4P19013 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 ABHD17AP1-201ENST00000358206 933 ntBASIC17.82■□□□□ 0.44
KRT4P19013 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.82■□□□□ 0.44
KRT4P19013 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 RPS2P55-201ENST00000397318 883 ntBASIC17.82■□□□□ 0.44
KRT4P19013 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT4P19013 AL355355.2-201ENST00000442321 338 ntBASIC17.82■□□□□ 0.44
KRT4P19013 AC107956.1-201ENST00000494359 873 ntBASIC17.82■□□□□ 0.44
KRT4P19013 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT4P19013 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 BX088651.1-201ENST00000540551 451 ntBASIC17.82■□□□□ 0.44
KRT4P19013 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT4P19013 AC113410.3-201ENST00000623366 203 ntBASIC17.82■□□□□ 0.44
KRT4P19013 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT4P19013 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT4P19013 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT4P19013 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
KRT4P19013 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT4P19013 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT4P19013 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms