Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
VCLP18206 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.88■□□□□ 0.45
VCLP18206 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VCLP18206 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 AL390719.2-201ENST00000606993 987 ntBASIC17.88■□□□□ 0.45
VCLP18206 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 AL139384.1-201ENST00000612143 3047 ntBASIC17.88■□□□□ 0.45
VCLP18206 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
VCLP18206 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 AL024508.2-201ENST00000607749 1894 ntBASIC17.88■□□□□ 0.45
VCLP18206 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VCLP18206 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VCLP18206 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 PKD1P1-201ENST00000458669 6805 ntBASIC17.87■□□□□ 0.45
VCLP18206 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 AC138028.4-201ENST00000564984 1845 ntBASIC17.87■□□□□ 0.45
VCLP18206 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.87■□□□□ 0.45
VCLP18206 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 TSSC2-201ENST00000450217 709 ntBASIC17.87■□□□□ 0.45
VCLP18206 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.87■□□□□ 0.45
VCLP18206 RNF126P1-202ENST00000569893 925 ntBASIC17.87■□□□□ 0.45
VCLP18206 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 AC090616.6-201ENST00000582640 721 ntBASIC17.87■□□□□ 0.45
VCLP18206 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.87■□□□□ 0.45
VCLP18206 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VCLP18206 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCLP18206 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VCLP18206 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VCLP18206 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.86■□□□□ 0.45
VCLP18206 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 CHCHD2P8-201ENST00000429873 447 ntBASIC17.86■□□□□ 0.45
VCLP18206 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.86■□□□□ 0.45
VCLP18206 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.86■□□□□ 0.45
VCLP18206 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 GUSBP12-201ENST00000513727 720 ntBASIC17.86■□□□□ 0.45
VCLP18206 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.86■□□□□ 0.45
VCLP18206 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 AL353692.3-201ENST00000407031 1396 ntBASIC17.86■□□□□ 0.45
VCLP18206 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VCLP18206 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VCLP18206 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCLP18206 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms