Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NCK1P16333 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.8■□□□□ 0.28
NCK1P16333 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 AC022898.2-201ENST00000616822 1312 ntBASIC16.8■□□□□ 0.28
NCK1P16333 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 AC010240.3-201ENST00000607688 395 ntBASIC16.8■□□□□ 0.28
NCK1P16333 REXO1L10P-201ENST00000615707 1290 ntBASIC16.8■□□□□ 0.28
NCK1P16333 REXO1L12P-201ENST00000622156 912 ntBASIC16.8■□□□□ 0.28
NCK1P16333 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NCK1P16333 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NCK1P16333 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.8■□□□□ 0.28
NCK1P16333 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
NCK1P16333 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 LINC00167-201ENST00000530583 1419 ntBASIC16.79■□□□□ 0.28
NCK1P16333 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 AC060834.1-201ENST00000443027 2032 ntBASIC16.79■□□□□ 0.28
NCK1P16333 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.79■□□□□ 0.28
NCK1P16333 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.79■□□□□ 0.28
NCK1P16333 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
NCK1P16333 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.79■□□□□ 0.28
NCK1P16333 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.79■□□□□ 0.28
NCK1P16333 AL023803.3-201ENST00000615559 522 ntBASIC16.79■□□□□ 0.28
NCK1P16333 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NCK1P16333 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCK1P16333 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCK1P16333 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NCK1P16333 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
NCK1P16333 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NCK1P16333 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NCK1P16333 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.78■□□□□ 0.28
NCK1P16333 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.78■□□□□ 0.28
NCK1P16333 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.78■□□□□ 0.28
NCK1P16333 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 MIR3180-4-201ENST00000582223 153 ntBASIC16.78■□□□□ 0.28
NCK1P16333 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.78■□□□□ 0.28
NCK1P16333 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NCK1P16333 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
NCK1P16333 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NCK1P16333 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms