Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 AC092597.1-201ENST00000487352 616 ntBASIC16.98■□□□□ 0.31
BCKDHAP12694 AC112698.1-201ENST00000510299 916 ntBASIC16.98■□□□□ 0.31
BCKDHAP12694 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.98■□□□□ 0.31
BCKDHAP12694 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.98■□□□□ 0.31
BCKDHAP12694 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BCKDHAP12694 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.98■□□□□ 0.31
BCKDHAP12694 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.98■□□□□ 0.31
BCKDHAP12694 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BCKDHAP12694 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
BCKDHAP12694 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 AC113347.1-201ENST00000413321 391 ntBASIC16.97■□□□□ 0.31
BCKDHAP12694 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.97■□□□□ 0.31
BCKDHAP12694 BX664615.1-201ENST00000443558 458 ntBASIC16.97■□□□□ 0.31
BCKDHAP12694 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 YBX1P2-201ENST00000489612 999 ntBASIC16.97■□□□□ 0.31
BCKDHAP12694 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.97■□□□□ 0.31
BCKDHAP12694 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.97■□□□□ 0.31
BCKDHAP12694 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 AC012306.2-201ENST00000609350 630 ntBASIC16.97■□□□□ 0.31
BCKDHAP12694 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 AC022211.2-201ENST00000585075 2527 ntBASIC16.97■□□□□ 0.31
BCKDHAP12694 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BCKDHAP12694 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BCKDHAP12694 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
BCKDHAP12694 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
BCKDHAP12694 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
BCKDHAP12694 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 TERF1P1-201ENST00000311003 1181 ntBASIC16.96■□□□□ 0.31
BCKDHAP12694 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 FAM8A6P-201ENST00000407496 1135 ntBASIC16.96■□□□□ 0.31
BCKDHAP12694 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
BCKDHAP12694 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
BCKDHAP12694 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.96■□□□□ 0.31
BCKDHAP12694 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.96■□□□□ 0.31
BCKDHAP12694 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.96■□□□□ 0.31
BCKDHAP12694 AC005363.2-201ENST00000618631 242 ntBASIC16.96■□□□□ 0.31
BCKDHAP12694 AC133561.5-201ENST00000635547 218 ntBASIC16.96■□□□□ 0.31
BCKDHAP12694 AC097493.4-201ENST00000641197 219 ntBASIC16.96■□□□□ 0.31
BCKDHAP12694 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BCKDHAP12694 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BCKDHAP12694 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms