Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 FAM207BP-201ENST00000447172 505 ntBASIC13.28□□□□□ -0.28
SMIM17P0DL12 AC091390.4-202ENST00000476426 537 ntBASIC13.28□□□□□ -0.28
SMIM17P0DL12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 CKBP1-201ENST00000565489 1086 ntBASIC13.28□□□□□ -0.28
SMIM17P0DL12 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 AL031985.4-201ENST00000642138 673 ntBASIC13.28□□□□□ -0.28
SMIM17P0DL12 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 KRT16P1-201ENST00000399124 1418 ntBASIC13.28□□□□□ -0.28
SMIM17P0DL12 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.27□□□□□ -0.28
SMIM17P0DL12 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SMIM17P0DL12 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM17P0DL12 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.27□□□□□ -0.28
SMIM17P0DL12 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM17P0DL12 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 MCCD1P1-208ENST00000445732 328 ntBASIC13.27□□□□□ -0.29
SMIM17P0DL12 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 RNA5SP413-201ENST00000516373 109 ntBASIC13.27□□□□□ -0.29
SMIM17P0DL12 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 AC110285.5-201ENST00000611501 352 ntBASIC13.27□□□□□ -0.29
SMIM17P0DL12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 AC034236.2-201ENST00000606662 1610 ntBASIC13.27□□□□□ -0.29
SMIM17P0DL12 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM17P0DL12 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 FLJ38576-201ENST00000623820 2459 ntBASIC13.27□□□□□ -0.29
SMIM17P0DL12 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM17P0DL12 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM17P0DL12 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM17P0DL12 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM17P0DL12 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM17P0DL12 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM17P0DL12 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
SMIM17P0DL12 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM17P0DL12 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms