Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SPARCP09486 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SPARCP09486 AC140113.3-201ENST00000605663 199 ntBASIC15.85■□□□□ 0.13
SPARCP09486 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SPARCP09486 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SPARCP09486 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.85■□□□□ 0.13
SPARCP09486 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPARCP09486 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPARCP09486 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPARCP09486 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SPARCP09486 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SPARCP09486 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 AC087499.1-201ENST00000418141 1075 ntBASIC15.84■□□□□ 0.13
SPARCP09486 ATP5G1P1-201ENST00000448724 379 ntBASIC15.84■□□□□ 0.13
SPARCP09486 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 AC145285.6-201ENST00000604632 637 ntBASIC15.84■□□□□ 0.13
SPARCP09486 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.84■□□□□ 0.13
SPARCP09486 AC116407.2-201ENST00000613639 860 ntBASIC15.84■□□□□ 0.13
SPARCP09486 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SPARCP09486 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.84■□□□□ 0.13
SPARCP09486 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
SPARCP09486 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPARCP09486 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SPARCP09486 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SPARCP09486 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SPARCP09486 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPARCP09486 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 SLC25A3P1-201ENST00000443844 931 ntBASIC15.83■□□□□ 0.12
SPARCP09486 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.83■□□□□ 0.12
SPARCP09486 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.83■□□□□ 0.12
SPARCP09486 AC024563.2-201ENST00000603282 481 ntBASIC15.83■□□□□ 0.12
SPARCP09486 AL138966.2-201ENST00000621997 464 ntBASIC15.83■□□□□ 0.12
SPARCP09486 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SPARCP09486 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPARCP09486 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPARCP09486 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPARCP09486 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPARCP09486 AC133963.1-201ENST00000504166 1679 ntBASIC15.83■□□□□ 0.12
SPARCP09486 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
SPARCP09486 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 AC108860.2-201ENST00000562760 2183 ntBASIC15.82■□□□□ 0.12
SPARCP09486 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.82■□□□□ 0.12
SPARCP09486 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPARCP09486 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms