Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CHGBP05060 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHGBP05060 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 KRT8P10-201ENST00000450021 1447 ntBASIC21.31■■□□□ 1
CHGBP05060 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CHGBP05060 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.31■■□□□ 1
CHGBP05060 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.31■■□□□ 1
CHGBP05060 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.31■■□□□ 1
CHGBP05060 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.31■■□□□ 1
CHGBP05060 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.31■■□□□ 1
CHGBP05060 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 AC111152.3-201ENST00000569699 673 ntBASIC21.31■■□□□ 1
CHGBP05060 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.31■■□□□ 1
CHGBP05060 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.31■■□□□ 1
CHGBP05060 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.31■■□□□ 1
CHGBP05060 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.31■■□□□ 1
CHGBP05060 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.31■■□□□ 1
CHGBP05060 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHGBP05060 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
CHGBP05060 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.3■■□□□ 1
CHGBP05060 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHGBP05060 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHGBP05060 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.3■■□□□ 1
CHGBP05060 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 FAM220CP-201ENST00000395253 831 ntBASIC21.3■■□□□ 1
CHGBP05060 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.3■■□□□ 1
CHGBP05060 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.3■■□□□ 1
CHGBP05060 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.3■■□□□ 1
CHGBP05060 AC009078.2-202ENST00000463353 338 ntBASIC21.3■■□□□ 1
CHGBP05060 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.3■■□□□ 1
CHGBP05060 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.3■■□□□ 1
CHGBP05060 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.3■■□□□ 1
CHGBP05060 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.3■■□□□ 1
CHGBP05060 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHGBP05060 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.3■■□□□ 1
CHGBP05060 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHGBP05060 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
CHGBP05060 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.29■■□□□ 1
CHGBP05060 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.29■■□□□ 1
CHGBP05060 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.29■■□□□ 1
CHGBP05060 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHGBP05060 PCDHB18P-201ENST00000524813 2368 ntBASIC21.29■■□□□ 1
CHGBP05060 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.29■■□□□ 1
CHGBP05060 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.29■■□□□ 1
CHGBP05060 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CHGBP05060 AD001527.2-201ENST00000622994 785 ntBASIC21.29■■□□□ 1
CHGBP05060 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.29■■□□□ 1
CHGBP05060 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHGBP05060 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHGBP05060 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 LINC00304-203ENST00000565008 1864 ntBASIC21.28■■□□□ 1
CHGBP05060 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHGBP05060 AC132938.5-201ENST00000624980 1813 ntBASIC21.28■■□□□ 1
CHGBP05060 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.28■■□□□ 1
CHGBP05060 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.28■■□□□ 1
CHGBP05060 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.28■■□□□ 1
CHGBP05060 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.28■■□□□ 1
CHGBP05060 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms