Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MT-ND3P03897 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MT-ND3P03897 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
MT-ND3P03897 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.12■□□□□ 0.49
MT-ND3P03897 HOMER2P1-201ENST00000455653 964 ntBASIC18.12■□□□□ 0.49
MT-ND3P03897 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.12■□□□□ 0.49
MT-ND3P03897 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.12■□□□□ 0.49
MT-ND3P03897 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 AC091076.1-201ENST00000610741 619 ntBASIC18.12■□□□□ 0.49
MT-ND3P03897 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MT-ND3P03897 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND3P03897 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND3P03897 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND3P03897 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND3P03897 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND3P03897 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MT-ND3P03897 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND3P03897 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MT-ND3P03897 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND3P03897 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
MT-ND3P03897 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.11■□□□□ 0.49
MT-ND3P03897 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MT-ND3P03897 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
MT-ND3P03897 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MT-ND3P03897 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.11■□□□□ 0.49
MT-ND3P03897 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.11■□□□□ 0.49
MT-ND3P03897 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.11■□□□□ 0.49
MT-ND3P03897 AC009065.1-201ENST00000564055 1225 ntBASIC18.11■□□□□ 0.49
MT-ND3P03897 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.11■□□□□ 0.49
MT-ND3P03897 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MT-ND3P03897 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MT-ND3P03897 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 AC022211.2-201ENST00000585075 2527 ntBASIC18.11■□□□□ 0.49
MT-ND3P03897 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND3P03897 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND3P03897 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
MT-ND3P03897 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
MT-ND3P03897 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.1■□□□□ 0.49
MT-ND3P03897 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.1■□□□□ 0.49
MT-ND3P03897 AP003041.3-201ENST00000527151 707 ntBASIC18.1■□□□□ 0.49
MT-ND3P03897 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.1■□□□□ 0.49
MT-ND3P03897 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms