Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAPGEF3O95398 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAPGEF3O95398 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RAPGEF3O95398 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RAPGEF3O95398 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAPGEF3O95398 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAPGEF3O95398 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 NME2P1-201ENST00000426182 414 ntBASIC26.39■■□□□ 1.82
RAPGEF3O95398 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC26.39■■□□□ 1.82
RAPGEF3O95398 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RAPGEF3O95398 AC140878.1-201ENST00000565277 250 ntBASIC26.39■■□□□ 1.82
RAPGEF3O95398 AC025048.6-201ENST00000634326 1161 ntBASIC26.39■■□□□ 1.82
RAPGEF3O95398 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RAPGEF3O95398 ADM-207ENST00000530439 1839 ntTSL 2 BASIC26.39■■□□□ 1.81
RAPGEF3O95398 AC093010.1-201ENST00000473625 1624 ntBASIC26.39■■□□□ 1.81
RAPGEF3O95398 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.81
RAPGEF3O95398 AC100803.2-201ENST00000562459 1963 ntBASIC26.38■■□□□ 1.81
RAPGEF3O95398 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAPGEF3O95398 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 AC008677.1-201ENST00000519230 1561 ntBASIC26.38■■□□□ 1.81
RAPGEF3O95398 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAPGEF3O95398 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAPGEF3O95398 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAPGEF3O95398 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 FAM86C2P-203ENST00000528684 1004 ntBASIC26.38■■□□□ 1.81
RAPGEF3O95398 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 TSFM-210ENST00000550559 897 ntTSL 5 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 AL596325.1-201ENST00000563991 1082 ntBASIC26.38■■□□□ 1.81
RAPGEF3O95398 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAPGEF3O95398 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RAPGEF3O95398 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 RAB34-224ENST00000636513 888 ntTSL 5 BASIC26.37■■□□□ 1.81
RAPGEF3O95398 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 AL590787.1-201ENST00000568856 1315 ntBASIC26.37■■□□□ 1.81
RAPGEF3O95398 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF3O95398 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 RBPMS2P1-201ENST00000437762 623 ntBASIC26.36■■□□□ 1.81
RAPGEF3O95398 SPDYE22P-201ENST00000582158 798 ntBASIC26.36■■□□□ 1.81
RAPGEF3O95398 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 SRP9-204ENST00000619790 377 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC26.36■■□□□ 1.81
RAPGEF3O95398 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF3O95398 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 COX5BP8-201ENST00000416911 349 ntBASIC26.35■■□□□ 1.81
RAPGEF3O95398 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 DUTP2-201ENST00000519164 463 ntBASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms