Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SUPT3HO75486 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SUPT3HO75486 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SUPT3HO75486 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SUPT3HO75486 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 LIN28AP1-201ENST00000429574 405 ntBASIC17.65■□□□□ 0.42
SUPT3HO75486 ATP5G1P1-201ENST00000448724 379 ntBASIC17.65■□□□□ 0.42
SUPT3HO75486 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.65■□□□□ 0.42
SUPT3HO75486 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.65■□□□□ 0.42
SUPT3HO75486 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SUPT3HO75486 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUPT3HO75486 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SUPT3HO75486 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SUPT3HO75486 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SUPT3HO75486 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.64■□□□□ 0.42
SUPT3HO75486 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SUPT3HO75486 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.64■□□□□ 0.42
SUPT3HO75486 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.64■□□□□ 0.42
SUPT3HO75486 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SUPT3HO75486 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 AC140113.3-201ENST00000605663 199 ntBASIC17.64■□□□□ 0.41
SUPT3HO75486 AL138966.2-201ENST00000621997 464 ntBASIC17.64■□□□□ 0.41
SUPT3HO75486 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.64■□□□□ 0.41
SUPT3HO75486 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SUPT3HO75486 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
SUPT3HO75486 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
SUPT3HO75486 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SUPT3HO75486 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.63■□□□□ 0.41
SUPT3HO75486 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.63■□□□□ 0.41
SUPT3HO75486 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.63■□□□□ 0.41
SUPT3HO75486 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.63■□□□□ 0.41
SUPT3HO75486 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.63■□□□□ 0.41
SUPT3HO75486 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SUPT3HO75486 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms