Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USH2AO75445 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 ACTBP11-201ENST00000436287 1126 ntBASIC7.85□□□□□ -1.15
USH2AO75445 NKTR-203ENST00000442970 646 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 GLI4-203ENST00000517468 963 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 AC017083.2-201ENST00000608069 979 ntBASIC7.85□□□□□ -1.15
USH2AO75445 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 MYCLP1-201ENST00000372451 1075 ntBASIC7.84□□□□□ -1.15
USH2AO75445 GIMAP3P-201ENST00000495150 836 ntBASIC7.84□□□□□ -1.15
USH2AO75445 IGHV3-42-201ENST00000520410 361 ntBASIC7.84□□□□□ -1.15
USH2AO75445 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 AC099778.1-201ENST00000568593 1911 ntBASIC7.84□□□□□ -1.15
USH2AO75445 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
USH2AO75445 ANKRD19P-201ENST00000338192 862 ntBASIC7.84□□□□□ -1.15
USH2AO75445 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 AC243562.1-201ENST00000560672 389 ntBASIC7.84□□□□□ -1.15
USH2AO75445 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC7.84□□□□□ -1.15
USH2AO75445 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC7.84□□□□□ -1.15
USH2AO75445 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
USH2AO75445 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC7.84□□□□□ -1.15
USH2AO75445 CDK4-206ENST00000549606 558 ntTSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 AC026120.1-201ENST00000611536 926 ntBASIC7.84□□□□□ -1.15
USH2AO75445 MIR6869-201ENST00000619434 62 ntBASIC7.84□□□□□ -1.15
USH2AO75445 AC007064.4-201ENST00000637740 555 ntBASIC7.84□□□□□ -1.15
USH2AO75445 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC7.84□□□□□ -1.15
USH2AO75445 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
USH2AO75445 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USH2AO75445 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC7.84□□□□□ -1.15
USH2AO75445 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
USH2AO75445 MPV17-208ENST00000405076 603 ntTSL 5 BASIC7.84□□□□□ -1.16
USH2AO75445 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
USH2AO75445 AC096633.1-201ENST00000422446 749 ntBASIC7.84□□□□□ -1.16
USH2AO75445 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC7.84□□□□□ -1.16
USH2AO75445 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC7.84□□□□□ -1.16
USH2AO75445 CD74-212ENST00000524315 584 ntTSL 5 BASIC7.84□□□□□ -1.16
USH2AO75445 RHOQP1-201ENST00000555758 579 ntBASIC7.84□□□□□ -1.16
USH2AO75445 ORC6-206ENST00000568364 888 ntTSL 5 BASIC7.84□□□□□ -1.16
USH2AO75445 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC7.84□□□□□ -1.16
USH2AO75445 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
USH2AO75445 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 AC092933.1-201ENST00000393644 945 ntBASIC7.83□□□□□ -1.16
USH2AO75445 HAUS4P1-201ENST00000406739 1145 ntBASIC7.83□□□□□ -1.16
USH2AO75445 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 AL671277.1-201ENST00000429656 993 ntBASIC7.83□□□□□ -1.16
USH2AO75445 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 SPDYE11-202ENST00000450699 704 ntBASIC7.83□□□□□ -1.16
USH2AO75445 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms