Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.52□□□□□ -0.09
SSSCA1O60232 AC124016.1-201ENST00000609552 612 ntBASIC14.52□□□□□ -0.09
SSSCA1O60232 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSSCA1O60232 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SSSCA1O60232 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.52□□□□□ -0.09
SSSCA1O60232 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC105020.1-201ENST00000435356 2205 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSSCA1O60232 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 AL024508.2-201ENST00000607749 1894 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.51□□□□□ -0.09
SSSCA1O60232 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.51□□□□□ -0.09
SSSCA1O60232 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 AC110285.5-201ENST00000611501 352 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SSSCA1O60232 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 AL109923.1-201ENST00000618799 583 ntBASIC14.51□□□□□ -0.09
SSSCA1O60232 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
SSSCA1O60232 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSSCA1O60232 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSSCA1O60232 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SSSCA1O60232 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
SSSCA1O60232 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.51□□□□□ -0.09
SSSCA1O60232 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSSCA1O60232 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSSCA1O60232 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.5□□□□□ -0.09
SSSCA1O60232 KRT18P23-201ENST00000435622 1283 ntBASIC14.5□□□□□ -0.09
SSSCA1O60232 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 B3GAT3P1-201ENST00000471720 806 ntBASIC14.5□□□□□ -0.09
SSSCA1O60232 AC011506.1-201ENST00000474329 610 ntBASIC14.5□□□□□ -0.09
SSSCA1O60232 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms