Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
DUX1O43812 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 REXO1L9P-201ENST00000604264 2108 ntBASIC16.99■□□□□ 0.31
DUX1O43812 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX1O43812 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.98■□□□□ 0.31
DUX1O43812 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX1O43812 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX1O43812 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX1O43812 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.98■□□□□ 0.31
DUX1O43812 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX1O43812 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX1O43812 AC003669.1-201ENST00000334569 611 ntBASIC16.98■□□□□ 0.31
DUX1O43812 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX1O43812 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
DUX1O43812 MIR940-201ENST00000401276 94 ntBASIC16.98■□□□□ 0.31
DUX1O43812 PRYP5-201ENST00000451909 266 ntBASIC16.98■□□□□ 0.31
DUX1O43812 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX1O43812 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.98■□□□□ 0.31
DUX1O43812 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.98■□□□□ 0.31
DUX1O43812 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX1O43812 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.98■□□□□ 0.31
DUX1O43812 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
DUX1O43812 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX1O43812 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 PMS2P7-201ENST00000506558 1336 ntBASIC16.97■□□□□ 0.31
DUX1O43812 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DUX1O43812 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 AC100803.2-201ENST00000562459 1963 ntBASIC16.97■□□□□ 0.31
DUX1O43812 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.97■□□□□ 0.31
DUX1O43812 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.97■□□□□ 0.31
DUX1O43812 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DUX1O43812 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.97■□□□□ 0.31
DUX1O43812 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.97■□□□□ 0.31
DUX1O43812 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.97■□□□□ 0.31
DUX1O43812 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.97■□□□□ 0.31
DUX1O43812 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DUX1O43812 Z83851.2-201ENST00000609564 659 ntBASIC16.97■□□□□ 0.31
DUX1O43812 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DUX1O43812 AC090164.3-201ENST00000610780 2143 ntBASIC16.97■□□□□ 0.31
DUX1O43812 AL049757.1-201ENST00000616842 1596 ntBASIC16.97■□□□□ 0.31
DUX1O43812 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DUX1O43812 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX1O43812 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
DUX1O43812 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 AC009949.1-201ENST00000623048 1830 ntBASIC16.96■□□□□ 0.31
DUX1O43812 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DUX1O43812 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DUX1O43812 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
DUX1O43812 RNA5SP415-201ENST00000517246 115 ntBASIC16.96■□□□□ 0.31
DUX1O43812 IGHV3-52-201ENST00000519770 353 ntBASIC16.96■□□□□ 0.31
DUX1O43812 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.96■□□□□ 0.31
DUX1O43812 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.96■□□□□ 0.31
DUX1O43812 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.96■□□□□ 0.31
DUX1O43812 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 AC027601.4-201ENST00000611259 610 ntBASIC16.96■□□□□ 0.31
DUX1O43812 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.96■□□□□ 0.31
DUX1O43812 PGM5P2-202ENST00000637225 1043 ntBASIC16.96■□□□□ 0.31
DUX1O43812 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX1O43812 AP002414.3-201ENST00000589352 1468 ntBASIC16.96■□□□□ 0.31
DUX1O43812 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms