Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AC006557.2-201ENST00000592985 1240 ntBASIC22.69■■□□□ 1.22
KCNQ3O43525 AL589182.2-201ENST00000619332 1049 ntBASIC22.69■■□□□ 1.22
KCNQ3O43525 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
KCNQ3O43525 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KCNQ3O43525 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.69■■□□□ 1.22
KCNQ3O43525 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
KCNQ3O43525 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
KCNQ3O43525 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 AC023274.1-201ENST00000418278 595 ntBASIC22.68■■□□□ 1.22
KCNQ3O43525 DDX43P3-201ENST00000441064 443 ntBASIC22.68■■□□□ 1.22
KCNQ3O43525 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.68■■□□□ 1.22
KCNQ3O43525 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
KCNQ3O43525 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KCNQ3O43525 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 BX276092.7-203ENST00000637198 1536 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.67■■□□□ 1.22
KCNQ3O43525 MIR1233-2-201ENST00000408138 82 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 MIR1233-1-201ENST00000408722 82 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 AL591424.1-201ENST00000442569 1213 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 AC108751.1-201ENST00000490852 363 ntBASIC22.67■■□□□ 1.22
KCNQ3O43525 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.67■■□□□ 1.22
KCNQ3O43525 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.67■■□□□ 1.22
KCNQ3O43525 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.67■■□□□ 1.22
KCNQ3O43525 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.67■■□□□ 1.22
KCNQ3O43525 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.67■■□□□ 1.22
KCNQ3O43525 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KCNQ3O43525 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
KCNQ3O43525 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.66■■□□□ 1.22
KCNQ3O43525 AC010327.4-202ENST00000591484 748 ntBASIC22.66■■□□□ 1.22
KCNQ3O43525 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 AC005593.1-201ENST00000624894 515 ntBASIC22.66■■□□□ 1.22
KCNQ3O43525 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 KRT18P55-202ENST00000578578 1546 ntBASIC22.66■■□□□ 1.22
KCNQ3O43525 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNQ3O43525 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
KCNQ3O43525 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.66■■□□□ 1.22
KCNQ3O43525 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 AC003669.1-201ENST00000334569 611 ntBASIC22.65■■□□□ 1.22
KCNQ3O43525 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 YBX2P1-201ENST00000394192 760 ntBASIC22.65■■□□□ 1.22
KCNQ3O43525 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.65■■□□□ 1.22
KCNQ3O43525 AC005104.2-201ENST00000427818 678 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms