Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.89■□□□□ 0.29
PROM1O43490 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PROM1O43490 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PROM1O43490 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.88■□□□□ 0.29
PROM1O43490 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PROM1O43490 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 AL592071.1-201ENST00000611956 408 ntBASIC16.88■□□□□ 0.29
PROM1O43490 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.88■□□□□ 0.29
PROM1O43490 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PROM1O43490 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PROM1O43490 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PROM1O43490 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.87■□□□□ 0.29
PROM1O43490 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.87■□□□□ 0.29
PROM1O43490 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
PROM1O43490 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 AC009949.1-201ENST00000623048 1830 ntBASIC16.87■□□□□ 0.29
PROM1O43490 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 CHCHD2P8-201ENST00000429873 447 ntBASIC16.87■□□□□ 0.29
PROM1O43490 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.87■□□□□ 0.29
PROM1O43490 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.87■□□□□ 0.29
PROM1O43490 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.87■□□□□ 0.29
PROM1O43490 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 AC139713.2-201ENST00000641328 2723 ntBASIC16.87■□□□□ 0.29
PROM1O43490 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PROM1O43490 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PROM1O43490 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.87■□□□□ 0.29
PROM1O43490 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
PROM1O43490 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PROM1O43490 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.86■□□□□ 0.29
PROM1O43490 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PROM1O43490 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PROM1O43490 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PROM1O43490 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PROM1O43490 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PROM1O43490 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms