Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MTSS1O43312 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.16■□□□□ 0.5
MTSS1O43312 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.16■□□□□ 0.5
MTSS1O43312 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
MTSS1O43312 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
MTSS1O43312 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTSS1O43312 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.15■□□□□ 0.5
MTSS1O43312 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.15■□□□□ 0.5
MTSS1O43312 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 AL031133.1-201ENST00000406807 723 ntBASIC18.15■□□□□ 0.5
MTSS1O43312 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 KRT8P26-201ENST00000534154 1276 ntBASIC18.15■□□□□ 0.5
MTSS1O43312 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MTSS1O43312 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
MTSS1O43312 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTSS1O43312 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTSS1O43312 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.14■□□□□ 0.5
MTSS1O43312 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 REXO1L11P-201ENST00000620964 1927 ntBASIC18.14■□□□□ 0.49
MTSS1O43312 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 AC005104.2-201ENST00000427818 678 ntBASIC18.14■□□□□ 0.49
MTSS1O43312 UPK3BP1-201ENST00000428678 509 ntBASIC18.14■□□□□ 0.49
MTSS1O43312 RN7SL606P-201ENST00000472779 293 ntBASIC18.14■□□□□ 0.49
MTSS1O43312 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.14■□□□□ 0.49
MTSS1O43312 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.14■□□□□ 0.49
MTSS1O43312 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.14■□□□□ 0.49
MTSS1O43312 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.14■□□□□ 0.49
MTSS1O43312 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.14■□□□□ 0.49
MTSS1O43312 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTSS1O43312 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.13■□□□□ 0.49
MTSS1O43312 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.13■□□□□ 0.49
MTSS1O43312 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
MTSS1O43312 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
MTSS1O43312 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.13■□□□□ 0.49
MTSS1O43312 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.13■□□□□ 0.49
MTSS1O43312 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.13■□□□□ 0.49
MTSS1O43312 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.13■□□□□ 0.49
MTSS1O43312 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
MTSS1O43312 AL353801.3-201ENST00000609898 542 ntBASIC18.13■□□□□ 0.49
MTSS1O43312 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.13■□□□□ 0.49
MTSS1O43312 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTSS1O43312 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTSS1O43312 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms