Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP2A1O14983 AC092865.5-201ENST00000545435 363 ntBASIC20.27■□□□□ 0.84
ATP2A1O14983 AC116407.2-201ENST00000613639 860 ntBASIC20.27■□□□□ 0.84
ATP2A1O14983 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
ATP2A1O14983 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2A1O14983 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2A1O14983 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2A1O14983 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2A1O14983 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
ATP2A1O14983 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ATP2A1O14983 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.27■□□□□ 0.83
ATP2A1O14983 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.27■□□□□ 0.83
ATP2A1O14983 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.27■□□□□ 0.83
ATP2A1O14983 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 KRT18P3-201ENST00000451602 1288 ntBASIC20.26■□□□□ 0.83
ATP2A1O14983 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
ATP2A1O14983 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2A1O14983 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.26■□□□□ 0.83
ATP2A1O14983 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2A1O14983 AC004706.3-202ENST00000621574 984 ntBASIC20.26■□□□□ 0.83
ATP2A1O14983 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A1O14983 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A1O14983 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A1O14983 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 AC135776.1-201ENST00000319817 2481 ntBASIC20.26■□□□□ 0.83
ATP2A1O14983 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2A1O14983 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2A1O14983 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2A1O14983 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2A1O14983 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2A1O14983 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 AC136632.2-201ENST00000512891 861 ntBASIC20.25■□□□□ 0.83
ATP2A1O14983 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2A1O14983 MIR1199-201ENST00000621445 119 ntBASIC20.25■□□□□ 0.83
ATP2A1O14983 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2A1O14983 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2A1O14983 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP2A1O14983 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.24■□□□□ 0.83
ATP2A1O14983 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.24■□□□□ 0.83
ATP2A1O14983 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 AC003669.1-201ENST00000334569 611 ntBASIC20.24■□□□□ 0.83
ATP2A1O14983 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A1O14983 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
ATP2A1O14983 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A1O14983 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms