Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 LYSMD4-203ENST00000378904 2122 ntBASIC17.23■□□□□ 0.35
UBFD1O14562 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBFD1O14562 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBFD1O14562 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.23■□□□□ 0.35
UBFD1O14562 AC092597.1-201ENST00000487352 616 ntBASIC17.23■□□□□ 0.35
UBFD1O14562 AC011558.1-201ENST00000623459 338 ntBASIC17.23■□□□□ 0.35
UBFD1O14562 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.23■□□□□ 0.35
UBFD1O14562 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
UBFD1O14562 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
UBFD1O14562 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UBFD1O14562 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
UBFD1O14562 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UBFD1O14562 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.22■□□□□ 0.35
UBFD1O14562 COX11P1-201ENST00000489116 835 ntBASIC17.22■□□□□ 0.35
UBFD1O14562 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.22■□□□□ 0.35
UBFD1O14562 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.22■□□□□ 0.35
UBFD1O14562 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.22■□□□□ 0.35
UBFD1O14562 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBFD1O14562 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.22■□□□□ 0.35
UBFD1O14562 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBFD1O14562 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.21■□□□□ 0.35
UBFD1O14562 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.21■□□□□ 0.35
UBFD1O14562 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
UBFD1O14562 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 TSPY12P-201ENST00000421279 868 ntBASIC17.21■□□□□ 0.35
UBFD1O14562 KRT18P48-201ENST00000434763 852 ntBASIC17.21■□□□□ 0.35
UBFD1O14562 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.21■□□□□ 0.35
UBFD1O14562 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.21■□□□□ 0.35
UBFD1O14562 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.21■□□□□ 0.35
UBFD1O14562 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBFD1O14562 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.21■□□□□ 0.35
UBFD1O14562 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.21■□□□□ 0.35
UBFD1O14562 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.21■□□□□ 0.35
UBFD1O14562 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
UBFD1O14562 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
UBFD1O14562 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBFD1O14562 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBFD1O14562 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBFD1O14562 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBFD1O14562 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms