Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.14■□□□□ 0.01
SDCBPO00560 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.14■□□□□ 0.01
SDCBPO00560 ECEL1P2-202ENST00000465689 757 ntBASIC15.14■□□□□ 0.01
SDCBPO00560 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.14■□□□□ 0.01
SDCBPO00560 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.14■□□□□ 0.01
SDCBPO00560 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.14■□□□□ 0.01
SDCBPO00560 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.14■□□□□ 0.01
SDCBPO00560 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SDCBPO00560 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SDCBPO00560 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDCBPO00560 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.14■□□□□ 0.01
SDCBPO00560 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 LINC01568-207ENST00000641790 1380 ntBASIC15.13■□□□□ 0.01
SDCBPO00560 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SDCBPO00560 HMGA1P5-201ENST00000412453 271 ntBASIC15.13■□□□□ 0.01
SDCBPO00560 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.13■□□□□ 0.01
SDCBPO00560 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.13■□□□□ 0.01
SDCBPO00560 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SDCBPO00560 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.13■□□□□ 0.01
SDCBPO00560 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDCBPO00560 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.13■□□□□ 0.01
SDCBPO00560 AC100803.2-201ENST00000562459 1963 ntBASIC15.13■□□□□ 0.01
SDCBPO00560 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 FER1L4-210ENST00000615531 5998 ntBASIC15.12■□□□□ 0.01
SDCBPO00560 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.12■□□□□ 0.01
SDCBPO00560 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.12■□□□□ 0.01
SDCBPO00560 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.12■□□□□ 0.01
SDCBPO00560 AC009947.2-201ENST00000444014 672 ntBASIC15.12■□□□□ 0.01
SDCBPO00560 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 AC104390.1-201ENST00000555663 520 ntBASIC15.12■□□□□ 0.01
SDCBPO00560 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.12■□□□□ 0.01
SDCBPO00560 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.12■□□□□ 0.01
SDCBPO00560 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDCBPO00560 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms