Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK2O00526 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK2O00526 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.27□□□□□ -0.13
UPK2O00526 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK2O00526 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.27□□□□□ -0.13
UPK2O00526 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK2O00526 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
UPK2O00526 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UPK2O00526 FAM8A6P-201ENST00000407496 1135 ntBASIC14.26□□□□□ -0.13
UPK2O00526 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 HLA-F-220ENST00000434407 884 ntBASIC14.26□□□□□ -0.13
UPK2O00526 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK2O00526 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK2O00526 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK2O00526 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
UPK2O00526 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UPK2O00526 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 AC080080.1-201ENST00000625121 2420 ntBASIC14.25□□□□□ -0.13
UPK2O00526 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
UPK2O00526 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK2O00526 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK2O00526 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK2O00526 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK2O00526 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK2O00526 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK2O00526 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 AP001094.4-201ENST00000579008 2176 ntBASIC14.25□□□□□ -0.13
UPK2O00526 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 STARP1-201ENST00000397973 869 ntBASIC14.25□□□□□ -0.13
UPK2O00526 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.25□□□□□ -0.13
UPK2O00526 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 AC112698.1-201ENST00000510299 916 ntBASIC14.25□□□□□ -0.13
UPK2O00526 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK2O00526 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.25□□□□□ -0.13
UPK2O00526 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK2O00526 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
UPK2O00526 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK2O00526 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms