Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 AC090340.1-201ENST00000620778 4980 ntBASIC19.01■□□□□ 0.63
FOXN3O00409 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 AC012313.1-201ENST00000593393 3059 ntBASIC19.01■□□□□ 0.63
FOXN3O00409 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN3O00409 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN3O00409 GUSBP12-201ENST00000513727 720 ntBASIC19.01■□□□□ 0.63
FOXN3O00409 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.01■□□□□ 0.63
FOXN3O00409 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN3O00409 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN3O00409 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 CROCCP2-202ENST00000412962 2773 ntBASIC19.01■□□□□ 0.63
FOXN3O00409 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN3O00409 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19■□□□□ 0.63
FOXN3O00409 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXN3O00409 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19■□□□□ 0.63
FOXN3O00409 BX276092.7-203ENST00000637198 1536 ntBASIC19■□□□□ 0.63
FOXN3O00409 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
FOXN3O00409 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19■□□□□ 0.63
FOXN3O00409 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXN3O00409 FXN-203ENST00000396366 922 ntTSL 2 BASIC19■□□□□ 0.63
FOXN3O00409 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 AL845331.1-201ENST00000424978 1190 ntBASIC19■□□□□ 0.63
FOXN3O00409 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 FAM86EP-206ENST00000510506 987 ntBASIC19■□□□□ 0.63
FOXN3O00409 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19■□□□□ 0.63
FOXN3O00409 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19■□□□□ 0.63
FOXN3O00409 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
FOXN3O00409 AC124864.1-201ENST00000623408 392 ntBASIC19■□□□□ 0.63
FOXN3O00409 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXN3O00409 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 HCG11-201ENST00000411553 5696 ntBASIC19■□□□□ 0.63
FOXN3O00409 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19■□□□□ 0.63
FOXN3O00409 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN3O00409 AC097374.2-201ENST00000618617 1306 ntBASIC19■□□□□ 0.63
FOXN3O00409 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
FOXN3O00409 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN3O00409 AC010460.3-201ENST00000511359 1579 ntBASIC18.99■□□□□ 0.63
FOXN3O00409 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN3O00409 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN3O00409 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXN3O00409 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.99■□□□□ 0.63
FOXN3O00409 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.99■□□□□ 0.63
FOXN3O00409 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.99■□□□□ 0.63
FOXN3O00409 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 AL121956.5-201ENST00000625261 221 ntBASIC18.99■□□□□ 0.63
FOXN3O00409 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXN3O00409 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
FOXN3O00409 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN3O00409 AC005332.1-201ENST00000577698 1310 ntBASIC18.99■□□□□ 0.63
FOXN3O00409 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms