Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TNFRSF11BO00300 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 LINC00167-201ENST00000530583 1419 ntBASIC16.45■□□□□ 0.22
TNFRSF11BO00300 AC092338.2-201ENST00000568827 1415 ntBASIC16.45■□□□□ 0.22
TNFRSF11BO00300 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 AC009949.1-201ENST00000623048 1830 ntBASIC16.45■□□□□ 0.22
TNFRSF11BO00300 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 REXO1L11P-201ENST00000620964 1927 ntBASIC16.45■□□□□ 0.22
TNFRSF11BO00300 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TNFRSF11BO00300 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 AC026471.5-201ENST00000615068 467 ntBASIC16.44■□□□□ 0.22
TNFRSF11BO00300 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF11BO00300 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 KRT18P29-201ENST00000397031 1267 ntBASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 AL049637.2-201ENST00000641778 930 ntBASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF11BO00300 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms