Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AL157384.1-201ENST00000445995 2473 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TMEM88BA6NKF7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 MRPS18AP1-201ENST00000414458 589 ntBASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 AC241585.1-201ENST00000433527 519 ntBASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 RPS2P32-201ENST00000439199 892 ntBASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 SPDYE14P-201ENST00000442619 822 ntBASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 AKAP8P1-201ENST00000434743 1349 ntBASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM88BA6NKF7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 AC092580.3-201ENST00000430932 139 ntBASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM88BA6NKF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 SLC25A6P5-201ENST00000435663 894 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 SPCS2P4-201ENST00000436160 681 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 IGHV3-62-201ENST00000520057 340 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 RARRES2P8-201ENST00000566335 367 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 STK25P1-201ENST00000585406 838 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 AC019129.2-201ENST00000609837 1235 ntBASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEM88BA6NKF7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms