Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 HBZP1-201ENST00000354915 429 ntBASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 AC092597.1-201ENST00000487352 616 ntBASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 KRT18P21-201ENST00000515767 1272 ntBASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 ZNF444P1-201ENST00000559497 298 ntBASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 AC084018.2-201ENST00000613093 2607 ntBASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DRB4X5D2U9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 LINC00167-201ENST00000530583 1419 ntBASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 LINC01311-201ENST00000565162 1445 ntBASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 FER1L4-210ENST00000615531 5998 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms