Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 MTCL1P1-201ENST00000446207 792 ntBASIC20.3■□□□□ 0.84
CLIC4Q9Y696 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 AL390719.2-201ENST00000606993 987 ntBASIC20.3■□□□□ 0.84
CLIC4Q9Y696 AC083849.1-201ENST00000615227 514 ntBASIC20.3■□□□□ 0.84
CLIC4Q9Y696 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC4Q9Y696 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 AC022211.2-201ENST00000585075 2527 ntBASIC20.29■□□□□ 0.84
CLIC4Q9Y696 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 AC009053.2-201ENST00000563701 2365 ntBASIC20.29■□□□□ 0.84
CLIC4Q9Y696 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC4Q9Y696 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 RCN1P1-201ENST00000400413 996 ntBASIC20.28■□□□□ 0.84
CLIC4Q9Y696 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 AC063952.2-201ENST00000498792 1227 ntBASIC20.28■□□□□ 0.84
CLIC4Q9Y696 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC4Q9Y696 Z83836.1-201ENST00000624605 1642 ntBASIC20.27■□□□□ 0.84
CLIC4Q9Y696 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 AC092647.4-201ENST00000457211 535 ntBASIC20.27■□□□□ 0.84
CLIC4Q9Y696 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 RN7SL850P-201ENST00000579959 291 ntBASIC20.27■□□□□ 0.84
CLIC4Q9Y696 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms