Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AL589182.2-201ENST00000619332 1049 ntBASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AC005593.1-201ENST00000624894 515 ntBASIC18.51■□□□□ 0.55
YIPF1Q9Y548 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC090164.3-201ENST00000610780 2143 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AL020996.1-203ENST00000536896 2307 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC087289.5-201ENST00000586076 3175 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 ELK2BP-201ENST00000415014 1224 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 KRT18P3-201ENST00000451602 1288 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.5■□□□□ 0.55
YIPF1Q9Y548 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
YIPF1Q9Y548 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 MIR1233-2-201ENST00000408138 82 ntBASIC18.49■□□□□ 0.55
YIPF1Q9Y548 MIR1233-1-201ENST00000408722 82 ntBASIC18.49■□□□□ 0.55
YIPF1Q9Y548 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 PGM5P2-202ENST00000637225 1043 ntBASIC18.49■□□□□ 0.55
YIPF1Q9Y548 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
YIPF1Q9Y548 AC004408.2-201ENST00000623613 2777 ntBASIC18.48■□□□□ 0.55
YIPF1Q9Y548 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 AC007967.2-201ENST00000432613 625 ntBASIC18.48■□□□□ 0.55
YIPF1Q9Y548 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms