Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF6Q9Y252 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF6Q9Y252 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF6Q9Y252 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF6Q9Y252 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF6Q9Y252 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF6Q9Y252 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
RNF6Q9Y252 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF6Q9Y252 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF6Q9Y252 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF6Q9Y252 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms