Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CUEDC1Q9NWM3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 DRAXINP1-201ENST00000437611 948 ntBASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 TOB2P1-201ENST00000469761 992 ntBASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 AP005901.3-202ENST00000581653 237 ntBASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 AL353801.3-201ENST00000609898 542 ntBASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CUEDC1Q9NWM3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CUEDC1Q9NWM3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 AC067852.2-201ENST00000590513 2313 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 AC009949.1-201ENST00000623048 1830 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 LINC00265-3P-201ENST00000447588 903 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 AC011840.4-201ENST00000578471 627 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 AC005336.2-201ENST00000593183 939 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 AC092329.2-201ENST00000598402 547 ntBASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CUEDC1Q9NWM3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms