Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 AL390719.2-201ENST00000606993 987 ntBASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 TSPY22P-201ENST00000427496 604 ntBASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 GPR32P1-201ENST00000601788 811 ntBASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 AC004263.2-201ENST00000617183 678 ntBASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN3Q9NQS3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN3Q9NQS3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AC016734.2-201ENST00000624325 1377 ntBASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 BX276092.5-203ENST00000456199 560 ntBASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 KRT8P26-201ENST00000534154 1276 ntBASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 AC093458.2-201ENST00000623150 629 ntBASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.05■□□□□ 0.32
NECTIN3Q9NQS3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms