Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC003669.1-201ENST00000334569 611 ntBASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC074386.1-202ENST00000463561 864 ntBASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL390955.2-201ENST00000603032 514 ntBASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL513210.1-201ENST00000629608 234 ntBASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC105339.1-204ENST00000636249 355 ntBASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 PC-208ENST00000529047 1607 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-1Q9BYQ7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC9.15□□□□□ -0.95
KRTAP4-1Q9BYQ7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms