Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 AC004263.2-201ENST00000617183 678 ntBASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 AL358472.4-201ENST00000633140 710 ntBASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 AC022898.2-201ENST00000616822 1312 ntBASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 ZNF444P1-201ENST00000559497 298 ntBASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
YIPF4Q9BSR8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
YIPF4Q9BSR8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 HOMER2P1-201ENST00000455653 964 ntBASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 AC113404.2-201ENST00000507884 177 ntBASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 VENTXP5-201ENST00000523979 775 ntBASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.76■□□□□ 0.27
YIPF4Q9BSR8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms