Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 AP000523.1-201ENST00000398242 1049 ntBASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC024563.2-201ENST00000603282 481 ntBASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.27
CPPED1Q9BRF8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPPED1Q9BRF8 OR6D1P-202ENST00000641007 5290 ntBASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 AC005104.2-201ENST00000427818 678 ntBASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 LYSMD4-203ENST00000378904 2122 ntBASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 AC016396.2-201ENST00000562575 1417 ntBASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPPED1Q9BRF8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPPED1Q9BRF8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms