Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AC090340.1-201ENST00000620778 4980 ntBASIC14.8□□□□□ -0.04
GAFA1Q96PS6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 BNIP3P18-201ENST00000593976 575 ntBASIC14.79□□□□□ -0.04
GAFA1Q96PS6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GAFA1Q96PS6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 AC096582.2-201ENST00000510860 516 ntBASIC14.78□□□□□ -0.04
GAFA1Q96PS6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 AC009533.2-201ENST00000543664 586 ntBASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GAFA1Q96PS6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GAFA1Q96PS6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms