Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.98■□□□□ 0.31
ITCHQ96J02 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
ITCHQ96J02 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
ITCHQ96J02 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.98■□□□□ 0.31
ITCHQ96J02 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.98■□□□□ 0.31
ITCHQ96J02 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ITCHQ96J02 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.98■□□□□ 0.31
ITCHQ96J02 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.98■□□□□ 0.31
ITCHQ96J02 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ITCHQ96J02 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 AP001094.4-201ENST00000579008 2176 ntBASIC16.98■□□□□ 0.31
ITCHQ96J02 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ITCHQ96J02 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.98■□□□□ 0.31
ITCHQ96J02 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITCHQ96J02 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.97■□□□□ 0.31
ITCHQ96J02 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
ITCHQ96J02 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.97■□□□□ 0.31
ITCHQ96J02 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.97■□□□□ 0.31
ITCHQ96J02 LINC01451-201ENST00000623792 534 ntBASIC16.97■□□□□ 0.31
ITCHQ96J02 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.97■□□□□ 0.31
ITCHQ96J02 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
ITCHQ96J02 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITCHQ96J02 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 CROCCP2-202ENST00000412962 2773 ntBASIC16.96■□□□□ 0.31
ITCHQ96J02 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.96■□□□□ 0.31
ITCHQ96J02 SNORA78-201ENST00000459373 127 ntBASIC16.96■□□□□ 0.31
ITCHQ96J02 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.96■□□□□ 0.31
ITCHQ96J02 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.96■□□□□ 0.31
ITCHQ96J02 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.96■□□□□ 0.31
ITCHQ96J02 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ITCHQ96J02 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITCHQ96J02 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ITCHQ96J02 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
ITCHQ96J02 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ITCHQ96J02 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
ITCHQ96J02 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.96■□□□□ 0.3
ITCHQ96J02 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ITCHQ96J02 AD000864.1-201ENST00000624076 2295 ntBASIC16.95■□□□□ 0.3
ITCHQ96J02 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ITCHQ96J02 CYP2D8P-201ENST00000433633 1490 ntBASIC16.95■□□□□ 0.3
ITCHQ96J02 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ITCHQ96J02 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.95■□□□□ 0.3
ITCHQ96J02 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.95■□□□□ 0.3
ITCHQ96J02 AP000523.1-201ENST00000398242 1049 ntBASIC16.95■□□□□ 0.3
ITCHQ96J02 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITCHQ96J02 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.95■□□□□ 0.3
ITCHQ96J02 AC113404.2-201ENST00000507884 177 ntBASIC16.95■□□□□ 0.3
ITCHQ96J02 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms