Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL513190.1-201ENST00000621254 727 ntBASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 C20orf181-201ENST00000623918 480 ntBASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 STK25P1-201ENST00000585406 838 ntBASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 AL805961.1-202ENST00000641562 540 ntBASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAPGEF4Q8WZA2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 STK19B-204ENST00000512515 211 ntBASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 AC100803.2-201ENST00000562459 1963 ntBASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 BX276092.7-203ENST00000637198 1536 ntBASIC23.18■■□□□ 1.3
RAPGEF4Q8WZA2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 HTR5BP-201ENST00000430851 1154 ntBASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 METTL21AP1-201ENST00000438852 635 ntBASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RAPGEF4Q8WZA2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 AC093677.2-201ENST00000600169 1863 ntBASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 AC254562.1-201ENST00000417586 456 ntBASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms