Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 SPDYE11-202ENST00000450699 704 ntBASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 SPDYE9P-201ENST00000570642 692 ntBASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 SPDYE10P-202ENST00000612005 668 ntBASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 SPDYE8P-202ENST00000612377 668 ntBASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.4■□□□□ 0.54
PRUNE2Q8WUY3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRUNE2Q8WUY3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 AC019129.2-201ENST00000609837 1235 ntBASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 AL162274.1-201ENST00000617191 1098 ntBASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRUNE2Q8WUY3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 AC243562.1-201ENST00000560672 389 ntBASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 KRT17P7-201ENST00000451704 1104 ntBASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 KLF4P1-201ENST00000412782 1185 ntBASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 AL355306.1-201ENST00000415580 579 ntBASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
PRUNE2Q8WUY3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.37■□□□□ 0.53
PRUNE2Q8WUY3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms