Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC103564.2-201ENST00000432853 1299 ntBASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 KRT126P-201ENST00000549467 1181 ntBASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 LINC01711-201ENST00000598340 967 ntBASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AC111152.3-201ENST00000569699 673 ntBASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 IFNL4P1-201ENST00000607083 540 ntBASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AC007613.1-201ENST00000572811 2597 ntBASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAM1L1Q8N609 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAM1L1Q8N609 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 AC012317.2-201ENST00000623305 2251 ntBASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms