Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 AL589935.2-201ENST00000616471 1231 ntBASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AL355312.1-201ENST00000407115 2176 ntBASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AC087388.1-201ENST00000571370 1112 ntBASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AL121956.5-201ENST00000625261 221 ntBASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC116Q8IYX3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 AC005332.1-201ENST00000577698 1310 ntBASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 AC120057.1-201ENST00000483947 663 ntBASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 FAM86EP-206ENST00000510506 987 ntBASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 GUSBP12-201ENST00000513727 720 ntBASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC116Q8IYX3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC116Q8IYX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms