Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.67■□□□□ 0.42
APLFQ8IW19 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.67■□□□□ 0.42
APLFQ8IW19 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 CLEC4GP1-201ENST00000596555 870 ntBASIC17.67■□□□□ 0.42
APLFQ8IW19 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APLFQ8IW19 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
APLFQ8IW19 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APLFQ8IW19 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 AC104417.2-201ENST00000562989 1793 ntBASIC17.66■□□□□ 0.42
APLFQ8IW19 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 LINC01311-201ENST00000565162 1445 ntBASIC17.66■□□□□ 0.42
APLFQ8IW19 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 ATP5G2P1-201ENST00000433580 426 ntBASIC17.66■□□□□ 0.42
APLFQ8IW19 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
APLFQ8IW19 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
APLFQ8IW19 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APLFQ8IW19 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.65■□□□□ 0.42
APLFQ8IW19 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.65■□□□□ 0.42
APLFQ8IW19 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
APLFQ8IW19 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
APLFQ8IW19 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.65■□□□□ 0.42
APLFQ8IW19 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.65■□□□□ 0.42
APLFQ8IW19 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.65■□□□□ 0.42
APLFQ8IW19 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.65■□□□□ 0.42
APLFQ8IW19 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.65■□□□□ 0.42
APLFQ8IW19 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APLFQ8IW19 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
APLFQ8IW19 SDHAP1-207ENST00000440850 2000 ntBASIC17.65■□□□□ 0.42
APLFQ8IW19 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APLFQ8IW19 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms