Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.86■□□□□ 0.13
LRRC28Q86X40 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC28Q86X40 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC28Q86X40 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 KRT18P57-201ENST00000443599 1254 ntBASIC15.85■□□□□ 0.13
LRRC28Q86X40 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRRC28Q86X40 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC28Q86X40 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 AC046158.3-201ENST00000624947 2558 ntBASIC15.84■□□□□ 0.13
LRRC28Q86X40 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 AP000593.1-201ENST00000393668 712 ntBASIC15.84■□□□□ 0.13
LRRC28Q86X40 BX664615.1-201ENST00000443558 458 ntBASIC15.84■□□□□ 0.13
LRRC28Q86X40 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms