Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 AC022898.2-201ENST00000616822 1312 ntBASIC16■□□□□ 0.15
NHLRC1Q6VVB1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 LINC01238-205ENST00000567549 1107 ntBASIC16■□□□□ 0.15
NHLRC1Q6VVB1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
NHLRC1Q6VVB1 KRT8P47-201ENST00000604727 1398 ntBASIC16■□□□□ 0.15
NHLRC1Q6VVB1 CEP83-AS1-201ENST00000623122 2482 ntBASIC16■□□□□ 0.15
NHLRC1Q6VVB1 AC080080.1-201ENST00000625121 2420 ntBASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 FAM86EP-206ENST00000510506 987 ntBASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 NTF6B-201ENST00000591913 560 ntBASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 HTR7P1-202ENST00000624664 4411 ntBASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NHLRC1Q6VVB1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 AC012317.2-201ENST00000623305 2251 ntBASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 TSPY12P-201ENST00000421279 868 ntBASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 RN7SL606P-201ENST00000472779 293 ntBASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 AL049597.2-201ENST00000565575 961 ntBASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NHLRC1Q6VVB1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NHLRC1Q6VVB1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.97■□□□□ 0.15
NHLRC1Q6VVB1 Z83836.1-201ENST00000624605 1642 ntBASIC15.97■□□□□ 0.15
NHLRC1Q6VVB1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
NHLRC1Q6VVB1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NHLRC1Q6VVB1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms