Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AC145285.6-201ENST00000604632 637 ntBASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AL023973.1-201ENST00000624619 620 ntBASIC18.18■□□□□ 0.5
CASC4Q6P4E1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 PP12613-201ENST00000424958 2230 ntBASIC18.18■□□□□ 0.5
CASC4Q6P4E1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 LINC00167-201ENST00000530583 1419 ntBASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AC066615.1-201ENST00000640911 628 ntBASIC18.17■□□□□ 0.5
CASC4Q6P4E1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CASC4Q6P4E1 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
CASC4Q6P4E1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.16■□□□□ 0.5
CASC4Q6P4E1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 AC141586.5-201ENST00000624546 2050 ntBASIC18.16■□□□□ 0.5
CASC4Q6P4E1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASC4Q6P4E1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms