Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 AC069335.1-201ENST00000489972 472 ntBASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 AL358472.5-202ENST00000641448 1267 ntBASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCRAQ6ISU1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 AC002056.1-201ENST00000395613 760 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 AC107890.1-201ENST00000422478 521 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SPDYE11-202ENST00000450699 704 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 CR383656.12-201ENST00000549567 513 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SPDYE9P-201ENST00000570642 692 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SPDYE10P-202ENST00000612005 668 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SPDYE8P-202ENST00000612377 668 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCRAQ6ISU1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 KRT8P48-201ENST00000515599 1220 ntBASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 FAM86C2P-203ENST00000528684 1004 ntBASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 AL512356.2-201ENST00000546955 174 ntBASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 AC027307.3-201ENST00000594262 1100 ntBASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCRAQ6ISU1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms