Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD4Q5XG99 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 KRT19P2-202ENST00000557173 1012 ntBASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AL031432.2-201ENST00000566714 459 ntBASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AL928711.1-201ENST00000570165 459 ntBASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 AC018445.3-201ENST00000624177 1945 ntBASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD4Q5XG99 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 FAM58CP-201ENST00000435741 640 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ACTG1P14-201ENST00000446382 1122 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 STK19B-204ENST00000512515 211 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC109462.3-201ENST00000573934 613 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC027612.4-201ENST00000605371 583 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 GGTLC5P-201ENST00000617623 998 ntBASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
LYSMD4Q5XG99 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms