Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AC008687.5-201ENST00000593746 558 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AC010240.3-201ENST00000607688 395 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AC018695.7-201ENST00000624587 2492 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AC009949.1-201ENST00000623048 1830 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 UBALD1-205ENST00000590891 2641 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 SLC25A1P2-201ENST00000430693 912 ntBASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 TSPY17P-201ENST00000450329 467 ntBASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AL353719.1-201ENST00000566847 864 ntBASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AL023803.3-201ENST00000615559 522 ntBASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 FAM197Y4-202ENST00000622692 608 ntBASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00242Q5T6M2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms