Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 AC093677.2-201ENST00000600169 1863 ntBASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 LINC00167-201ENST00000530583 1419 ntBASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDSS1Q5T2R2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 AC246785.2-201ENST00000432512 513 ntBASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 RN7SL606P-201ENST00000472779 293 ntBASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 OR6D1P-203ENST00000641209 4860 ntBASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.17■□□□□ 0.18
PDSS1Q5T2R2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AC068472.1-201ENST00000474589 881 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 DUTP2-201ENST00000519164 463 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AC092119.3-201ENST00000612618 583 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 NPAP1P7-201ENST00000613027 823 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AL096828.2-201ENST00000567259 1965 ntBASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDSS1Q5T2R2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 AC135776.1-201ENST00000319817 2481 ntBASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.15■□□□□ 0.18
PDSS1Q5T2R2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms