Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 AC109462.3-201ENST00000573934 613 ntBASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 AL390754.1-201ENST00000619088 582 ntBASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 FO538757.1-201ENST00000623083 1397 ntBASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNAPC4Q5SXM2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 AC107890.1-201ENST00000422478 521 ntBASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 STK19B-204ENST00000512515 211 ntBASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 CYP51A1P2-201ENST00000419457 1499 ntBASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 TUBB3P1-201ENST00000405796 1332 ntBASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC28.8■■■□□ 2.2
SNAPC4Q5SXM2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 TREML5P-201ENST00000421694 576 ntBASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
SNAPC4Q5SXM2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SPDYE11-202ENST00000450699 704 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SPDYE9P-201ENST00000570642 692 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SPDYE10P-202ENST00000612005 668 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SPDYE8P-202ENST00000612377 668 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 FAM185BP-201ENST00000443595 716 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 AL513480.1-201ENST00000451731 511 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 SLC25A39P2-201ENST00000537614 270 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 AL008721.1-201ENST00000609964 604 ntBASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SNAPC4Q5SXM2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 AC079140.1-201ENST00000508039 487 ntBASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SNAPC4Q5SXM2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms