Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 AC116353.5-201ENST00000638148 1699 ntBASIC16.25■□□□□ 0.19
RBM48Q5RL73 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 AC004980.1-204ENST00000429707 299 ntBASIC16.25■□□□□ 0.19
RBM48Q5RL73 CROCCP5-201ENST00000436658 830 ntBASIC16.25■□□□□ 0.19
RBM48Q5RL73 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 MIR5787-201ENST00000611784 55 ntBASIC16.25■□□□□ 0.19
RBM48Q5RL73 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBM48Q5RL73 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RBM48Q5RL73 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 GPAT2P1-201ENST00000444924 1672 ntBASIC16.24■□□□□ 0.19
RBM48Q5RL73 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 REXO1L11P-201ENST00000620964 1927 ntBASIC16.24■□□□□ 0.19
RBM48Q5RL73 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.24■□□□□ 0.19
RBM48Q5RL73 AC006970.2-201ENST00000450065 779 ntBASIC16.24■□□□□ 0.19
RBM48Q5RL73 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 MIR4758-201ENST00000577688 71 ntBASIC16.24■□□□□ 0.19
RBM48Q5RL73 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.24■□□□□ 0.19
RBM48Q5RL73 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBM48Q5RL73 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.23■□□□□ 0.19
RBM48Q5RL73 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.23■□□□□ 0.19
RBM48Q5RL73 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.23■□□□□ 0.19
RBM48Q5RL73 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RBM48Q5RL73 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RBM48Q5RL73 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBM48Q5RL73 AC004951.3-201ENST00000418645 1148 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms