Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.71■□□□□ 0.91
CCDC96Q2M329 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC96Q2M329 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC96Q2M329 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.7■□□□□ 0.91
CCDC96Q2M329 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC96Q2M329 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC96Q2M329 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 MRPL3P1-201ENST00000400109 1033 ntBASIC20.7■□□□□ 0.9
CCDC96Q2M329 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 MTDHP3-201ENST00000594186 672 ntBASIC20.7■□□□□ 0.9
CCDC96Q2M329 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC96Q2M329 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC96Q2M329 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AP000997.3-201ENST00000623333 2250 ntBASIC20.69■□□□□ 0.9
CCDC96Q2M329 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AC096633.1-201ENST00000422446 749 ntBASIC20.69■□□□□ 0.9
CCDC96Q2M329 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 SLC25A6P4-201ENST00000586535 553 ntBASIC20.69■□□□□ 0.9
CCDC96Q2M329 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AL355877.3-201ENST00000622820 899 ntBASIC20.69■□□□□ 0.9
CCDC96Q2M329 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AC097374.2-201ENST00000618617 1306 ntBASIC20.69■□□□□ 0.9
CCDC96Q2M329 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC96Q2M329 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC96Q2M329 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC96Q2M329 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC96Q2M329 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC96Q2M329 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC96Q2M329 RBM17P3-201ENST00000417687 1192 ntBASIC20.68■□□□□ 0.9
CCDC96Q2M329 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC96Q2M329 FAM197Y8-203ENST00000450145 560 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms