Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ADH5P3-201ENST00000433842 1137 ntBASIC21.94■■□□□ 1.1
DDR1Q08345 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.94■■□□□ 1.1
DDR1Q08345 AC023141.5-201ENST00000458585 616 ntBASIC21.94■■□□□ 1.1
DDR1Q08345 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
DDR1Q08345 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.94■■□□□ 1.1
DDR1Q08345 AC093520.2-201ENST00000561830 333 ntBASIC21.94■■□□□ 1.1
DDR1Q08345 MIR4745-201ENST00000577608 62 ntBASIC21.94■■□□□ 1.1
DDR1Q08345 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.94■■□□□ 1.1
DDR1Q08345 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 REXO1L3P-201ENST00000622202 1288 ntBASIC21.94■■□□□ 1.1
DDR1Q08345 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
DDR1Q08345 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.94■■□□□ 1.1
DDR1Q08345 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDR1Q08345 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDR1Q08345 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
DDR1Q08345 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.93■■□□□ 1.1
DDR1Q08345 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
DDR1Q08345 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.93■■□□□ 1.1
DDR1Q08345 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.93■■□□□ 1.1
DDR1Q08345 STK19B-204ENST00000512515 211 ntBASIC21.93■■□□□ 1.1
DDR1Q08345 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.93■■□□□ 1.1
DDR1Q08345 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDR1Q08345 AC006116.8-202ENST00000587620 1550 ntBASIC21.93■■□□□ 1.1
DDR1Q08345 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.93■■□□□ 1.1
DDR1Q08345 LINC00628-201ENST00000628516 1289 ntBASIC21.93■■□□□ 1.1
DDR1Q08345 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.93■■□□□ 1.1
DDR1Q08345 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.93■■□□□ 1.1
DDR1Q08345 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDR1Q08345 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.92■■□□□ 1.1
DDR1Q08345 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.92■■□□□ 1.1
DDR1Q08345 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.92■■□□□ 1.1
DDR1Q08345 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.92■■□□□ 1.1
DDR1Q08345 CXCL1P1-201ENST00000502804 216 ntBASIC21.92■■□□□ 1.1
DDR1Q08345 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDR1Q08345 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.92■■□□□ 1.1
DDR1Q08345 AC025678.2-201ENST00000562061 970 ntBASIC21.92■■□□□ 1.1
DDR1Q08345 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.92■■□□□ 1.1
DDR1Q08345 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDR1Q08345 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 AC100803.2-201ENST00000562459 1963 ntBASIC21.92■■□□□ 1.1
DDR1Q08345 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDR1Q08345 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDR1Q08345 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.92■■□□□ 1.1
DDR1Q08345 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.91■■□□□ 1.1
DDR1Q08345 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.91■■□□□ 1.1
DDR1Q08345 AC009336.1-201ENST00000608941 1553 ntBASIC21.91■■□□□ 1.1
DDR1Q08345 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDR1Q08345 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
DDR1Q08345 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDR1Q08345 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.91■■□□□ 1.1
DDR1Q08345 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDR1Q08345 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.91■■□□□ 1.1
DDR1Q08345 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.91■■□□□ 1.1
DDR1Q08345 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
DDR1Q08345 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDR1Q08345 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDR1Q08345 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDR1Q08345 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.9■■□□□ 1.1
DDR1Q08345 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.9■■□□□ 1.1
DDR1Q08345 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.9■■□□□ 1.1
DDR1Q08345 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
DDR1Q08345 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
DDR1Q08345 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.9■■□□□ 1.1
DDR1Q08345 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.9■■□□□ 1.1
DDR1Q08345 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDR1Q08345 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.9■■□□□ 1.1
DDR1Q08345 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms